STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM87028.1Comg operon protein 2. (338 aa)    
Predicted Functional Partners:
KRM87029.1
ComG operon protein 1.
 
 0.998
KRM87027.1
Hypothetical protein.
 
  
 0.983
KRM87026.1
Hypothetical protein.
  
  
 0.975
KRM83016.1
ComE operon protein 3.
  
  
 0.868
KRM82320.1
comEA protein.
  
  
 0.777
KRM89411.1
Hypothetical protein.
 
  
 0.770
KRM87023.1
Hypothetical protein.
       0.723
KRM87024.1
Hypothetical protein.
       0.723
KRM87025.1
Hypothetical protein.
       0.723
KRM87022.1
Adenine-specific DNA methylase.
       0.707
Your Current Organism:
Lactobacillus vini
NCBI taxonomy Id: 1133569
Other names: L. vini DSM 20605, Lactobacillus sp. CECT 5924, Lactobacillus sp. DSM 20605, Lactobacillus vini CECT 5924, Lactobacillus vini DSM 20605, Lactobacillus vini str. DSM 20605, Lactobacillus vini strain DSM 20605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.