STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM89350.1Oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein; Belongs to the ABC transporter superfamily. (347 aa)    
Predicted Functional Partners:
KRM89351.1
Peptide nickel transport system permease protein.
 
 0.999
KRM87038.1
ABC transporter, permease protein.
 
 0.997
KRM89352.1
Oligopeptide transport system permease.
 
 0.997
KRM87039.1
Dipeptide transport system permease protein DppB.
 
 0.980
KRM89349.1
Oligopeptide transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
0.973
KRM88971.1
ABC-type dipeptide oligopeptide nickel transport system, permease component.
 
 0.952
KRM88970.1
Oligopeptide abc superfamily atp binding cassette transporter, membrane protein.
 
 0.945
KRM84954.1
Oligopeptide ABC superfamily ATP binding cassette transporter, binding protein.
 
 0.943
KRM89353.1
Oligopeptide-binding protein.
 
 0.923
KRM88969.1
Hypothetical protein; Belongs to the ABC transporter superfamily.
 
 
0.904
Your Current Organism:
Lactobacillus vini
NCBI taxonomy Id: 1133569
Other names: L. vini DSM 20605, Lactobacillus sp. CECT 5924, Lactobacillus sp. DSM 20605, Lactobacillus vini CECT 5924, Lactobacillus vini DSM 20605, Lactobacillus vini str. DSM 20605, Lactobacillus vini strain DSM 20605
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