STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM84956.1ABC transporter substrate-binding protein. (277 aa)    
Predicted Functional Partners:
KRM88684.1
Polar amino acid ABC transporter inner membrane subunit.
 0.993
KRM89592.1
Amino acid ABC transporter permease.
  0.986
KRM89108.1
Polar amino acid ABC transporter permease.
 
 0.978
KRM89593.1
ABC transporter ATP-binding protein.
 
 0.866
KRM88685.1
Hypothetical protein.
 
 0.863
KRM89797.1
ABC transporter, ATP-binding protein.
 
 0.861
KRM84780.1
ABC transporter.
 
 0.855
KRM89107.1
Glutamine ABC superfamily ATP binding cassette transporter, ABC protein.
 
 0.774
KRM84955.1
Acetylornithine deacetylase succinyl-diaminopimelate desuccinylase-like protein.
  
  
 0.757
KRM84781.1
Glutamine-binding protein glutamine transport system permease.
 
 
0.616
Your Current Organism:
Lactobacillus vini
NCBI taxonomy Id: 1133569
Other names: L. vini DSM 20605, Lactobacillus sp. CECT 5924, Lactobacillus sp. DSM 20605, Lactobacillus vini CECT 5924, Lactobacillus vini DSM 20605, Lactobacillus vini str. DSM 20605, Lactobacillus vini strain DSM 20605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.