STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJG_1388ABC transporter ATP-binding protein. (253 aa)    
Predicted Functional Partners:
SHJG_1387
ABC transporter permease protein.
  
 0.967
SHJG_5423
Putative ABC transporter permease protein.
 
  
 0.843
SHJG_6069
Putative ABC transporter permease protein.
  
 0.837
SHJG_3747
Putative ABC-transporter, transmembrane component.
  
 0.835
SHJG_3169
ABC-transporter transmembrane protein.
 
  
 0.834
SHJG_5934
ABC type II transporter.
 
   
 0.784
SHJG_2089
ABC transporter, permease component.
 
  
 0.773
SHJG_7125
ABC transporter ATP-binding protein.
 
    
0.648
SHJG_1385
acyl-CoA dehydrogenase.
  
   0.574
SHJG_1386
Thioesterase.
       0.546
Your Current Organism:
Streptomyces hygroscopicus jinggangensis
NCBI taxonomy Id: 1133850
Other names: S. hygroscopicus subsp. jinggangensis 5008, Streptomyces hygroscopicus subsp. jinggangensis 5008, Streptomyces hygroscopicus subsp. jinggangensis str. 5008, Streptomyces hygroscopicus subsp. jinggangensis strain 5008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.