STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJG_3437Hypothetical protein. (188 aa)    
Predicted Functional Partners:
SHJG_3436
Hypothetical protein.
 
     0.746
SHJG_3438
Hypothetical protein.
       0.572
SHJG_3439
Integral membrane protein.
       0.571
SHJG_3440
Putative glutamate synthase small subunit.
       0.571
SHJG_0775
GCN5-related N-acetyltransferase.
  
     0.559
SHJG_8194
Putative integral membrane protein.
  
     0.543
SHJG_8021
Hypothetical protein.
  
     0.495
SHJG_4541
Hypothetical protein.
  
     0.489
SHJG_8103
Transmembrane transport protein; Belongs to the purine-cytosine permease (2.A.39) family.
  
     0.486
SHJG_3461
Hypothetical protein.
  
     0.453
Your Current Organism:
Streptomyces hygroscopicus jinggangensis
NCBI taxonomy Id: 1133850
Other names: S. hygroscopicus subsp. jinggangensis 5008, Streptomyces hygroscopicus subsp. jinggangensis 5008, Streptomyces hygroscopicus subsp. jinggangensis str. 5008, Streptomyces hygroscopicus subsp. jinggangensis strain 5008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.