STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJG_4483Regulatory protein. (330 aa)    
Predicted Functional Partners:
SHJG_4484
Lipoprotein.
 
  
 0.979
SHJG_4482
Secreted protein.
 
     0.935
SHJG_4481
Integral membrane protein.
 
     0.932
SHJG_4480
Putative integral membrane protein.
 
     0.822
SHJG_4485
Hypothetical protein.
 
    0.662
SHJG_4478
Putative two-component system response regulator.
  
    0.658
SHJG_4479
Translation initiation factor; Belongs to the eIF-2B alpha/beta/delta subunits family.
       0.641
SHJG_3576
Hypothetical protein.
 
  
 0.627
SHJG_4477
Two-component system histidine kinase.
       0.617
SHJG_3575
Hypothetical protein.
 
  
 0.557
Your Current Organism:
Streptomyces hygroscopicus jinggangensis
NCBI taxonomy Id: 1133850
Other names: S. hygroscopicus subsp. jinggangensis 5008, Streptomyces hygroscopicus subsp. jinggangensis 5008, Streptomyces hygroscopicus subsp. jinggangensis str. 5008, Streptomyces hygroscopicus subsp. jinggangensis strain 5008
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