STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJG_5851LacI/GalR family transcriptional repressor. (343 aa)    
Predicted Functional Partners:
SHJG_1844
NRPS protein.
    
 
 0.811
SHJG_3502
Glutamate synthase large subunit.
    
 
 0.724
SHJG_6945
Phosphocarrier protein.
   
 
 0.493
SHJG_5852
Transcriptional regulator.
       0.479
tsaD-2
O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
       0.467
SHJG_5850
Hypothetical protein.
       0.467
SHJG_1671
NRPS NcpA.
    
 
 0.466
SHJG_5848
Acetyltransferase.
       0.466
SHJG_8374
Linear gramicidin synthetase subunit C; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 
 0.466
SHJG_7710
Putative beta-D-xylosidase.
 
     0.462
Your Current Organism:
Streptomyces hygroscopicus jinggangensis
NCBI taxonomy Id: 1133850
Other names: S. hygroscopicus subsp. jinggangensis 5008, Streptomyces hygroscopicus subsp. jinggangensis 5008, Streptomyces hygroscopicus subsp. jinggangensis str. 5008, Streptomyces hygroscopicus subsp. jinggangensis strain 5008
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