STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJG_7825Hypothetical protein. (279 aa)    
Predicted Functional Partners:
SHJG_8264
Beta-lactamase.
  
     0.648
SHJG_4634
Hypothetical protein.
  
     0.577
SHJG_5440
Hypothetical protein.
  
     0.570
SHJG_1425
Putative transposase.
  
     0.567
SHJG_5003
Putative integral membrane protein.
  
     0.565
SHJG_1159
Putative TetR-family transcriptional regulator.
  
     0.561
SHJG_7824
Hypothetical protein.
       0.555
SHJG_7057
Hypothetical protein.
  
     0.545
SHJG_1025
Hypothetical protein.
  
     0.532
SHJG_7358
Putative acetyltransferase.
  
     0.532
Your Current Organism:
Streptomyces hygroscopicus jinggangensis
NCBI taxonomy Id: 1133850
Other names: S. hygroscopicus subsp. jinggangensis 5008, Streptomyces hygroscopicus subsp. jinggangensis 5008, Streptomyces hygroscopicus subsp. jinggangensis str. 5008, Streptomyces hygroscopicus subsp. jinggangensis strain 5008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.