STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000472425_05559Unannotated protein. (286 aa)    
Predicted Functional Partners:
GCA_000472425_05558
Unannotated protein.
 
     0.938
GCA_000472425_05557
Unannotated protein.
       0.746
GCA_000472425_02907
Unannotated protein.
 
     0.690
GCA_000472425_05715
Unannotated protein.
  
     0.538
GCA_000472425_01728
Unannotated protein.
  
     0.510
GCA_000472425_05560
Unannotated protein.
       0.508
GCA_000472425_06605
Unannotated protein.
  
     0.490
GCA_000472425_01730
Unannotated protein.
  
     0.477
GCA_000472425_05561
Unannotated protein.
       0.442
GCA_000472425_06962
Unannotated protein.
 
     0.426
Your Current Organism:
Bradyrhizobium sp. Tv2a2
NCBI taxonomy Id: 113395
Other names: B. sp. Tv2a-2, Bradyrhizobium sp. Tv2a-2, Bradyrhizobium sp. Tv2a.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.