STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL79037.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (535 aa)    
Predicted Functional Partners:
KPL79040.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.822
KPL79038.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.798
KPL79230.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.795
KPL77304.1
Glucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.714
KPL79229.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.712
KPL79035.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.693
KPL78430.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.691
KPL77802.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.678
KPL77269.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.668
KPL78331.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.656
Your Current Organism:
Ornatilinea apprima
NCBI taxonomy Id: 1134406
Other names: DSM 23815, Levilinea sp. P3M-1, O. apprima, Ornatilinea apprima Podosokorskaya et al. 2013, VKM B-2669, strain P3M-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.