STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smcHypothetical protein; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1201 aa)    
Predicted Functional Partners:
KPL77905.1
Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
 
 
 0.981
KPL79075.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.892
KPL74332.1
Transcriptional regulator; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
 
 
 0.889
KPL71398.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.843
KPL71433.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.830
KPL77329.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.816
KPL71447.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.816
guaB
Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 0.811
KPL79667.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.801
KPL78676.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.801
Your Current Organism:
Ornatilinea apprima
NCBI taxonomy Id: 1134406
Other names: DSM 23815, Levilinea sp. P3M-1, O. apprima, Ornatilinea apprima Podosokorskaya et al. 2013, VKM B-2669, strain P3M-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.