STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO36087.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (436 aa)    
Predicted Functional Partners:
AMO36084.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.952
AMO36086.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.952
AMO36079.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.918
AMO36078.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.916
AMO36080.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.916
AMO36081.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.916
AMO36073.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.882
AMO36075.1
Putative baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.882
AMO36076.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.882
AMO36077.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.882
Your Current Organism:
Thauera humireducens
NCBI taxonomy Id: 1134435
Other names: CCTCC M 2011497, KACC 16524, T. humireducens, Thauera humireducens Yang et al. 2013, Thauera sp. Sgz-1, strain SgZ-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.