STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000258595_01360Unannotated protein. (773 aa)    
Predicted Functional Partners:
GCA_000258595_01361
Unannotated protein.
 0.999
GCA_000258595_01362
Unannotated protein.
 
  
  0.984
GCA_000258595_00594
Unannotated protein.
     
 0.674
GCA_000258595_02352
Unannotated protein.
 
 
 0.665
GCA_000258595_03753
Unannotated protein.
 
     0.663
GCA_000258595_01673
Unannotated protein.
    
  0.655
GCA_000258595_01981
Unannotated protein.
    
  0.655
GCA_000258595_00378
Unannotated protein.
 
  
 0.654
GCA_000258595_03754
Unannotated protein.
       0.568
GCA_000258595_02377
Unannotated protein.
 
  
 0.564
Your Current Organism:
Streptomyces somaliensis
NCBI taxonomy Id: 1134445
Other names: S. somaliensis DSM 40738, Streptomyces somaliensis ATCC 33201, Streptomyces somaliensis DSM 40738, Streptomyces somaliensis str. DSM 40738, Streptomyces somaliensis strain DSM 40738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.