STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000283235_00180Unannotated protein. (484 aa)    
Predicted Functional Partners:
GCA_000283235_00181
Unannotated protein.
 
     0.932
GCA_000283235_00177
Unannotated protein.
 
   
 0.830
GCA_000283235_00178
Unannotated protein.
       0.786
GCA_000283235_00179
Unannotated protein.
       0.773
GCA_000283235_03021
Unannotated protein.
  
     0.745
GCA_000283235_00172
Unannotated protein.
 
     0.715
GCA_000283235_00174
Unannotated protein.
 
     0.652
GCA_000283235_00176
Unannotated protein.
       0.634
GCA_000283235_00175
Unannotated protein.
       0.614
GCA_000283235_00173
Unannotated protein.
 
     0.611
Your Current Organism:
Methylocystis parvus
NCBI taxonomy Id: 1134912
Other names: M. parvus OBBP, Methylocystis parvus OBBP, Methylocystis parvus str. OBBP, Methylocystis parvus strain OBBP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.