STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000283235_01547Unannotated protein. (487 aa)    
Predicted Functional Partners:
GCA_000283235_01277
Unannotated protein.
 
  
 0.879
GCA_000283235_01548
Unannotated protein.
 
  
 0.869
RfbB
Unannotated protein.
  
  
 0.737
RfbC
Unannotated protein.
  
  
 0.735
GCA_000283235_01551
Unannotated protein.
 
  
 0.726
RfbA
Unannotated protein.
  
  
 0.714
GCA_000283235_01253
Unannotated protein.
 
  
 0.703
GCA_000283235_01244
Unannotated protein.
 
  
 0.673
GCA_000283235_02035
Unannotated protein.
 
  
 0.673
GCA_000283235_01256
Unannotated protein.
 
  
 0.630
Your Current Organism:
Methylocystis parvus
NCBI taxonomy Id: 1134912
Other names: M. parvus OBBP, Methylocystis parvus OBBP, Methylocystis parvus str. OBBP, Methylocystis parvus strain OBBP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.