STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000283235_02112Unannotated protein. (134 aa)    
Predicted Functional Partners:
GCA_000283235_02109
Unannotated protein.
    
 0.851
GCA_000283235_02110
Unannotated protein.
    
 0.851
GCA_000283235_02111
Unannotated protein.
       0.773
GCA_000283235_00303
Unannotated protein.
  
 
 0.689
GCA_000283235_02113
Unannotated protein.
    
 0.595
GCA_000283235_00592
Unannotated protein.
 
 0.583
GCA_000283235_02078
Unannotated protein.
  
     0.559
Rnc
Unannotated protein.
  
  
  0.558
GCA_000283235_02114
Unannotated protein.
 
   
 0.523
FabD
Unannotated protein.
     
 0.522
Your Current Organism:
Methylocystis parvus
NCBI taxonomy Id: 1134912
Other names: M. parvus OBBP, Methylocystis parvus OBBP, Methylocystis parvus str. OBBP, Methylocystis parvus strain OBBP
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.