STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000283235_02192Unannotated protein. (415 aa)    
Predicted Functional Partners:
GCA_000283235_01416
Unannotated protein.
 
     0.777
LptG
Unannotated protein.
  
     0.589
GlgB
Unannotated protein.
   
 0.571
GCA_000283235_02191
Unannotated protein.
       0.559
GCA_000283235_02193
Unannotated protein.
       0.548
GCA_000283235_00986
Unannotated protein.
  
     0.532
GCA_000283235_00351
Unannotated protein.
 
   
 0.526
GCA_000283235_00984
Unannotated protein.
  
     0.502
GCA_000283235_03939
Unannotated protein.
  
     0.482
GCA_000283235_01277
Unannotated protein.
  
  
 0.477
Your Current Organism:
Methylocystis parvus
NCBI taxonomy Id: 1134912
Other names: M. parvus OBBP, Methylocystis parvus OBBP, Methylocystis parvus str. OBBP, Methylocystis parvus strain OBBP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.