STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000283235_04087Unannotated protein. (458 aa)    
Predicted Functional Partners:
GCA_000283235_00303
Unannotated protein.
  
 0.981
GCA_000283235_01946
Unannotated protein.
 
  
 
 0.918
PolA
Unannotated protein.
    
 0.907
GCA_000283235_00061
Unannotated protein.
    
  0.873
GCA_000283235_02368
Unannotated protein.
  
 0.698
GCA_000283235_01753
Unannotated protein.
   
 0.683
GCA_000283235_01809
Unannotated protein.
    
 0.672
GCA_000283235_04086
Unannotated protein.
 
 0.670
GCA_000283235_01808
Unannotated protein.
    
 0.665
GCA_000283235_01796
Unannotated protein.
 
 0.662
Your Current Organism:
Methylocystis parvus
NCBI taxonomy Id: 1134912
Other names: M. parvus OBBP, Methylocystis parvus OBBP, Methylocystis parvus str. OBBP, Methylocystis parvus strain OBBP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.