STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tceancTranscription elongation factor A N-terminal and central domain-containing protein-like. (638 aa)    
Predicted Functional Partners:
polr2e
DNA-directed RNA polymerases i II and III subunit rpabc1-like.
   
 0.893
polr2j
DNA-directed RNA polymerase II subunit RPB11-a.
   
 0.888
polr2f
DNA-directed RNA polymerases I, II, and III subunit RPABC2-like.
   
 0.887
polr2k
DNA-directed RNA polymerases I, II, and III subunit RPABC4-like.
   
 0.885
polr2d
DNA-directed RNA polymerase II subunit RPB4-like.
   
 0.885
polr1d
DNA-directed RNA polymerases I and III subunit RPAC2-like.
  
 0.884
polr2h
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 0.882
polr2l
Uncharacterized protein.
   
 0.879
polr2c
DNA-directed RNA polymerase II subunit RPB3-like.
   
 0.877
Polr2b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.875
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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