STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108926293Transmembrane emp24 domain-containing protein 6-like. (241 aa)    
Predicted Functional Partners:
LOC108936680
Transmembrane emp24 domain-containing protein 10-like.
   
 
 0.524
tmed10
Transmembrane emp24 domain-containing protein 10-like.
   
 
 0.524
Cep76
Centrosomal protein of 76 kDa-like.
      
 0.519
ostm1
Osteopetrosis-associated transmembrane protein 1-like.
   
  
 0.510
Ufm1
LOW QUALITY PROTEIN: ubiquitin-fold modifier 1.
      
 0.497
trabd
TraB domain-containing protein-like.
      
 0.487
LOC108936204
Transmembrane emp24 domain-containing protein 2 isoform X1.
   
 
 0.485
TMED2
Transmembrane emp24 domain-containing protein 2-like.
   
 
 0.485
LOC108938132
Transmembrane emp24 domain-containing protein 4-like.
   
 
 0.484
nip7
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
  
 0.482
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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