STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtmr7Myotubularin-related protein 7-like. (644 aa)    
Predicted Functional Partners:
FIG4
Polyphosphoinositide phosphatase-like.
   
 
 0.932
pikfyve
1-phosphatidylinositol 3-phosphate 5-kinase-like.
     
 0.930
inpp5f
Phosphatidylinositide phosphatase SAC2-like.
     
 0.912
INPP4A
Type I inositol 3,4-bisphosphate 4-phosphatase-like.
     
 0.906
LOC108924462
Type II inositol 3,4-bisphosphate 4-phosphatase-like.
     
 0.906
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
     
 0.905
LOC108937836
Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).
 
   
  0.900
PIP4K2A
Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha-like.
     
  0.900
pip4p2
Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase.
 
   
  0.900
LOC108930395
PLCXc domain-containing protein.
     
  0.900
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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