STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z043_123939Ig-like domain-containing protein. (214 aa)    
Predicted Functional Partners:
ENSSFOP00015000340
annotation not available
   
 0.706
ENSSFOP00015002190
T-cell surface glycoprotein CD2.
   
 0.706
FANCM
Uncharacterized protein.
    
 0.636
pold2
Pold2 protein-like.
    
 0.630
pold1
DNA polymerase.
   
 0.606
mus81
Crossover junction endonuclease MUS81-like.
    
 0.577
snrpe
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.566
ddx20
Putative ATP-dependent RNA helicase DDX20; Belongs to the DEAD box helicase family.
   
 0.532
Snrpf
Small nuclear ribonucleoprotein F-like.
    
  0.528
Z043_124568
Survival motor neuron protein 1-like.
    
 0.520
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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