STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbfaPutative ribosome-binding factor A, mitochondrial. (366 aa)    
Predicted Functional Partners:
mettl15
Probable methyltransferase-like protein 15 isoform X2.
    
 
 0.868
Mrps21
Mitochondrial 28S ribosomal protein s21-like.
   
   0.852
mrps7
28S ribosomal protein S7, mitochondrial-like.
    
   0.832
mrps11
28S ribosomal protein S11, mitochondrial-like; Belongs to the universal ribosomal protein uS11 family.
    
   0.832
kiaa0100
Fmp27_GFWDK domain-containing protein.
   
 
 0.799
tfb1m
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
    
 
 0.799
mrps15
28S ribosomal protein S15, mitochondrial-like; Belongs to the universal ribosomal protein uS15 family.
    
 
 0.781
dap3
28S ribosomal protein S29, mitochondrial-like.
    
 
 0.775
mrps26
28S ribosomal protein S26, mitochondrial-like.
   
   0.769
mrps23
28S ribosomal protein S23, mitochondrial-like.
   
   0.763
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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