STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pkdccExtracellular tyrosine-protein kinase PKDCC-like. (533 aa)    
Predicted Functional Partners:
Z043_116930
Cytochrome c oxidase assembly protein 1-like.
      
 0.683
mib2
Uncharacterized protein.
   
 0.581
Z043_102720
Ubiquitin-conjugating enzyme E2 variant 1-like.
   
 0.551
birc6
Baculoviral IAP repeat-containing protein 6-like.
   
 0.508
LOC108924088
Intersectin-2-like.
   
 0.488
LOC108922646
Uncharacterized protein.
   
 0.488
Traf7
E3 ubiquitin-protein ligase TRAF7-like.
   
 0.463
LOC108941509
E3 ubiquitin-protein ligase pellino2-like.
    
 0.449
LOC108941509-2
E3 ubiquitin-protein ligase pellino homolog 2.
    
 0.449
peli3
E3 ubiquitin-protein ligase pellino 1-like.
    
 0.449
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.