STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
actr6ARP6 actin-related protein 6-like; Belongs to the actin family. (396 aa)    
Predicted Functional Partners:
Cfap221
Cilia- and flagella-associated protein 221 isoform X1.
   
 
 0.986
ruvbl1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 
 0.980
ruvbl2
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 
 0.965
vps72
YL1_C domain-containing protein.
    
 
 0.942
LOC108938788
DNA methyltransferase 1-associated protein 1-like.
    
 
 0.880
yeats4
YEATS domain-containing protein 4-like.
   
 
 0.867
ENSSFOP00015045226
Snf2-related CREBBP activator protein.
    
 
 0.855
Z043_105328
E1A-binding protein p400-like.
    
 
 0.855
sf3b4
Splicing factor 3B subunit 4-like.
 
  
   0.846
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 
 0.833
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.