STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108924398Myocardin-like. (778 aa)    
Predicted Functional Partners:
exoc4
Sec8_exocyst domain-containing protein.
    
 0.587
Lrguk
Leucine-rich repeat and guanylate kinase domain-containing protein-like.
   
 
 0.584
LOC108936307
Rab-like protein 2A-like.
   
 0.575
rab11a
Ras-related protein Rab-11A-like.
   
 0.575
LOC108919849
Ras-related protein rab-11b-like.
   
 0.575
rab11b
Ras-related protein Rab-11B.
   
 0.575
LOC108930347
Ras-related protein Rab-25-like.
   
 0.575
LOC108930419
Ras-related protein Rab-11A-like.
   
 0.575
LOC108921616
Uncharacterized protein.
   
 0.575
unc45a
Protein unc-45A-like.
    
 
 0.466
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.