STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108928639Uncharacterized protein LOC108928639 isoform X1. (195 aa)    
Predicted Functional Partners:
LOC108937977
Interleukin-18 receptor 1-like.
   
 0.994
ENSSFOP00015017818
Interleukin-18 receptor accessory protein-like.
   
 0.989
LOC108922456
Caspase-1-like; Belongs to the peptidase C14A family.
   
 0.956
Z043_114052
C-Jun protein-like.
     
 0.917
Z043_101654
Transcription factor p65-like.
     
 0.912
nfkb1
Uncharacterized protein.
   
 
 0.907
il10
Interleukin 10.
   
 
 0.742
LOC108922084
T-cell surface glycoprotein CD4-like isoform X1.
   
  
 0.701
pycard
Apoptosis-associated speck-like protein containing a CARD-like.
   
  
 0.602
LOC108925208
Uncharacterized protein.
     
 0.583
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.