STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srfbp1Serum response factor-binding protein 1-like. (466 aa)    
Predicted Functional Partners:
polrmt
RPOL_N domain-containing protein.
   
 0.969
bysl
Bystin-like.
   
 
 0.910
tsr1
Pre-rRNA-processing protein TSR1-like.
   
 
 0.852
pwp2
Periodic tryptophan protein 2-like.
   
 
 0.838
imp4
U3 small nucleolar ribonucleoprotein IMP4-like.
   
   0.809
Rps11
40S ribosomal protein S11-like; Belongs to the universal ribosomal protein uS17 family.
  
 
 0.801
wdr3
WD repeat-containing protein 3-like.
   
   0.797
wdr36
WD_REPEATS_REGION domain-containing protein.
   
   0.793
rps18
40S ribosomal protein S18-like; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.792
utp3
Something about silencing protein 10-like.
   
   0.788
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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