STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108942248Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. (202 aa)    
Predicted Functional Partners:
Z043_104959
Cyclin-G-associated kinase-like.
     
 0.612
Prdx4
Peroxiredoxin-4-like.
  
  
 0.477
eef1g
Elongation factor 1-gamma-like.
   
  
 0.420
LOC108923489
Thioredoxin domain-containing protein.
  
  
 0.405
prdx3
Thioredoxin-dependent peroxide reductase, mitochondrial-like.
  
  
 0.405
LOC108939766
Thioredoxin domain-containing protein.
  
  
 0.405
Z043_117832
Natural killer cell enhancement factor-like.
  
  
 0.405
LOC108935117
Peroxiredoxin-6-like.
  
  
 0.405
PRDX1
Peroxiredoxin-1-like.
  
  
 0.405
LOC108935250
Peroxiredoxin-1-like.
  
  
 0.405
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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