STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aplp1Amyloid-like protein 2-like. (706 aa)    
Predicted Functional Partners:
Sorl1
Uncharacterized protein.
    
 0.757
NCSTN
Nicastrin-like.
    
 0.682
psenen
Gamma-secretase subunit Psenen-like.
    
 0.601
tnfrsf21
Death domain-containing protein.
    
 
 0.598
LOC108919370
Presenilin-1-like.
    
 
 0.578
psen2
Presenilin-2-like.
    
 
 0.578
fkrp
Fukutin-related protein-like.
     
 0.572
bace1
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
    
 0.572
LOC108932129
Beta-secretase 2-like; Belongs to the peptidase A1 family.
    
 0.572
apba1
Amyloid beta A4 protein-binding family A member 1-like.
   
 
 0.568
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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