STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kcnf1Potassium voltage-gated channel subfamily F member 1-like; Belongs to the potassium channel family. (487 aa)    
Predicted Functional Partners:
LOC108930839
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.859
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.859
rpl35
60S ribosomal protein L35-like.
   
 0.757
Rpl35a
Uncharacterized protein.
   
 0.756
rpl31
60S ribosomal protein L31-like.
   
 0.756
Rpl23a
60S ribosomal protein L23a-like; Belongs to the universal ribosomal protein uL23 family.
   
 0.753
Rpl29
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.753
Rpl24
Large subunit ribosomal protein L24e.
   
 0.750
rpl32
Ribosomal protein L32-like.
   
 0.750
Rpl5
60S ribosomal protein L5-like.
   
 0.739
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.