STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kctd13BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1-like. (334 aa)    
Predicted Functional Partners:
Z043_120376
UBX domain-containing protein 7.
    
 
 0.892
ubxn1
UBX domain-containing protein 1-like.
   
 
 0.681
cul3
Cullin-3-like; Belongs to the cullin family.
    
 0.669
faf1
FAS-associated factor 1-like.
    
 
 0.647
sez6l2
Seizure 6-like protein 2-like.
 
   
 0.579
Kif22
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
 
    
 0.574
Prrt2
Uncharacterized protein.
    
 
 0.563
Z043_112049
Protein yippee-like; Belongs to the yippee family.
      
 0.552
RND2
Rho-related GTP-binding protein RhoN-like.
    
 0.536
LOC108941593
Rho-related GTP-binding protein RhoN-like.
    
 0.536
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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