YTHDC2 protein (Scleropages formosus) - STRING interaction network

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Score

YTHDC2

YTH domain-containing protein. (1403 aa)

Predicted Functional Partners:

LOC108924088

0.962

LOC108922646

0.962

cpsf2

0.905

cstf1

0.893

cstf3

0.891

LOC108933968

0.889

nudt21

0.889

Cpsf1

0.883

clp1

0.853

pcf11

0.832

Your Current Organism:

Scleropages formosus

NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cpsf1	LOC108933968	ENSSFOP00015046287	ENSSFOP00015017678	Cleavage and polyadenylation specificity factor subunit 1-like.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.800
Cpsf1	YTHDC2	ENSSFOP00015046287	ENSSFOP00015005599	Cleavage and polyadenylation specificity factor subunit 1-like.	YTH domain-containing protein.	0.883
Cpsf1	clp1	ENSSFOP00015046287	ENSSFOP00015000845	Cleavage and polyadenylation specificity factor subunit 1-like.	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	0.915
Cpsf1	cpsf2	ENSSFOP00015046287	ENSSFOP00015003303	Cleavage and polyadenylation specificity factor subunit 1-like.	Cleavage and polyadenylation specificity factor subunit 2.	0.999
Cpsf1	cstf1	ENSSFOP00015046287	ENSSFOP00015023340	Cleavage and polyadenylation specificity factor subunit 1-like.	Cleavage stimulation factor subunit 1-like.	0.887
Cpsf1	cstf3	ENSSFOP00015046287	ENSSFOP00015064177	Cleavage and polyadenylation specificity factor subunit 1-like.	Cleavage stimulation factor subunit 3-like.	0.984
Cpsf1	nudt21	ENSSFOP00015046287	ENSSFOP00015064304	Cleavage and polyadenylation specificity factor subunit 1-like.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.800
Cpsf1	pcf11	ENSSFOP00015046287	ENSSFOP00015008533	Cleavage and polyadenylation specificity factor subunit 1-like.	Pre-mRNA cleavage complex 2 protein Pcf11-like.	0.989
LOC108922646	LOC108924088	ENSSFOP00015028384	ENSSFOP00015000719	Uncharacterized protein.	Intersectin-2-like.	0.944
LOC108922646	YTHDC2	ENSSFOP00015028384	ENSSFOP00015005599	Uncharacterized protein.	YTH domain-containing protein.	0.962
LOC108924088	LOC108922646	ENSSFOP00015000719	ENSSFOP00015028384	Intersectin-2-like.	Uncharacterized protein.	0.944
LOC108924088	YTHDC2	ENSSFOP00015000719	ENSSFOP00015005599	Intersectin-2-like.	YTH domain-containing protein.	0.962
LOC108933968	Cpsf1	ENSSFOP00015017678	ENSSFOP00015046287	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Cleavage and polyadenylation specificity factor subunit 1-like.	0.800
LOC108933968	YTHDC2	ENSSFOP00015017678	ENSSFOP00015005599	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	YTH domain-containing protein.	0.889
LOC108933968	clp1	ENSSFOP00015017678	ENSSFOP00015000845	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	0.829
LOC108933968	cpsf2	ENSSFOP00015017678	ENSSFOP00015003303	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Cleavage and polyadenylation specificity factor subunit 2.	0.876
LOC108933968	cstf1	ENSSFOP00015017678	ENSSFOP00015023340	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Cleavage stimulation factor subunit 1-like.	0.867
LOC108933968	cstf3	ENSSFOP00015017678	ENSSFOP00015064177	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Cleavage stimulation factor subunit 3-like.	0.805
LOC108933968	nudt21	ENSSFOP00015017678	ENSSFOP00015064304	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.900
LOC108933968	pcf11	ENSSFOP00015017678	ENSSFOP00015008533	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Pre-mRNA cleavage complex 2 protein Pcf11-like.	0.839