STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108929806Protein kinase domain-containing protein. (418 aa)    
Predicted Functional Partners:
LOC108938306
Heat shock protein beta-1-like; Belongs to the small heat shock protein (HSP20) family.
   
 0.981
LOC108936146
Uncharacterized protein.
   
 0.981
LOC108931124
Mitogen-activated protein kinase.
  
 
0.978
mapk11
Mitogen-activated protein kinase.
  
 
0.977
LOC108938227
Mitogen-activated protein kinase.
  
 
0.977
LOC108928253
Mitogen-activated protein kinase.
  
 
0.977
Z043_118805
MAP kinase-activated protein kinase 2-like.
  
 
 
0.971
MAPKAPK2
MAP kinase-activated protein kinase 2-like.
  
 
 
0.971
HSPB1
Heat shock protein beta-1-like; Belongs to the small heat shock protein (HSP20) family.
    
 0.941
atf4
Cyclic AMP-dependent transcription factor ATF-4-like.
     
  0.900
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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