STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108927497GATA-type zinc finger protein 1-like. (596 aa)    
Predicted Functional Partners:
tbp
TATA-box-binding protein-like.
   
 0.551
Z043_123412
Uncharacterized protein.
   
 0.551
nfyc
Nuclear transcription factor Y subunit gamma.
   
 
 0.527
chrac1
Chromatin accessibility complex protein 1 isoform X1.
   
 
 0.527
NFYB
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.518
NFYB-2
Nuclear transcription factor y subunit beta-like.
    
 
 0.518
Z043_104665
RunxI domain-containing protein.
    
 0.471
Z043_104622
CREB-binding protein-like.
    
 0.471
runx3
Runt domain-containing protein.
    
 0.471
Z043_102097
CREB-binding protein-like.
    
 0.471
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.