STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xpaDNA repair protein complementing XP-A cells-like. (271 aa)    
Predicted Functional Partners:
ercc2
TFIIH basal transcription factor complex helicase XPD subunit-like.
    
 0.984
FANCM
Uncharacterized protein.
    
 0.982
ercc4
DNA repair endonuclease XPF-like.
    
 0.982
ercc1
DNA excision repair protein ERCC-1-like.
    
 0.981
ercc3
TFIIH basal transcription factor complex helicase XPB subunit-like.
    
 0.980
ercc6
DNA excision repair protein ERCC-6-like.
    
 0.978
gtf2h1
General transcription factor IIH subunit 1-like.
    
 0.966
Z043_106750
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.951
faap24
Fanconi anemia-associated protein of 24 kDa-like.
    
 0.950
gtf2h3
General transcription factor IIH subunit 3-like.
   
 0.943
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.