STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ripk2Receptor-interacting serine/threonine-protein kinase 2-like. (587 aa)    
Predicted Functional Partners:
LOC108925196
E3 ubiquitin-protein ligase XIAP-like.
   
 0.992
nod1
Nucleotide-binding oligomerization domain-containing protein 1-like.
   
 0.986
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.981
nod2
NOD2a protein-like.
   
 0.981
tab3
RanBP2-type domain-containing protein.
    
 0.972
tab1
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1-like.
   
 0.972
LOC108934246
Baculoviral IAP repeat-containing 3-like.
   
 0.968
tnfaip3
Tumor necrosis factor alpha-induced protein 3-like.
   
 0.964
tab2
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2-like.
    
 0.963
traf5
TNF receptor-associated factor.
   
 0.953
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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