STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108937303Homeobox B6a-like. (223 aa)    
Predicted Functional Partners:
hoxb7
Homeobox protein HoxA/B7.
  
 
0.942
hoxb5
Homeobox protein Hox-B5a-like.
   
 
0.804
HOXB5
Homeobox protein Hox-B5a-like.
   
 
0.804
HOXC4
Homeobox protein Hox-C4a-like.
  
 
0.733
LOC108939268
Homeobox protein Hox-C4a-like.
  
 
0.731
hoxb4
Homeobox protein Hox-B4-like.
   
  
0.693
HOXA7
Homeobox protein Hox-A7-like.
   
  
0.690
LOC108933383
Homeobox protein Hox-A4a-like.
   
 
0.689
hoxd4
Homeobox protein Hox-D4-like.
   
 
0.628
LOC108935734
Pre-B-cell leukemia transcription factor 4-like.
    
 0.624
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.