STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108938306Heat shock protein beta-1-like; Belongs to the small heat shock protein (HSP20) family. (214 aa)    
Predicted Functional Partners:
Z043_118805
MAP kinase-activated protein kinase 2-like.
   
 0.987
MAPKAPK2
MAP kinase-activated protein kinase 2-like.
   
 0.987
mapkapk5
MAP kinase-activated protein kinase 5-like.
    
 0.986
LOC108929806
Protein kinase domain-containing protein.
   
 0.981
HSPB1
Heat shock protein beta-1-like; Belongs to the small heat shock protein (HSP20) family.
  
  
 
0.904
LOC108936146
Uncharacterized protein.
  
  
 
0.902
LOC108936916
MAP kinase-activated protein kinase 3-like.
   
 0.825
bag3
BAG family molecular chaperone regulator 3-like.
   
 
 0.746
cryab
Alpha-crystallin B chain-like; Belongs to the small heat shock protein (HSP20) family.
   
0.719
Daxx
Daxx domain-containing protein.
    
 
 0.708
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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