gxylt1 protein (Scleropages formosus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

gxylt1

Glucoside xylosyltransferase 1-like. (452 aa)

Predicted Functional Partners:

gxylt2

0.903

svbp

0.590

pgk1

0.571

Exd1

0.570

poglut1

0.557

alg11

0.517

Tmem117

0.495

LOC108932096

0.486

exoc2

0.485

map3k7

0.485

Your Current Organism:

Scleropages formosus

NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Exd1	exoc2	ENSSFOP00015026203	ENSSFOP00015021481	3'-5' exonuclease domain-containing protein.	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.	0.446
Exd1	gxylt1	ENSSFOP00015026203	ENSSFOP00015007812	3'-5' exonuclease domain-containing protein.	Glucoside xylosyltransferase 1-like.	0.570
Exd1	gxylt2	ENSSFOP00015026203	ENSSFOP00015025209	3'-5' exonuclease domain-containing protein.	Glucoside xylosyltransferase 2-like.	0.439
Exd1	map3k7	ENSSFOP00015026203	ENSSFOP00015033798	3'-5' exonuclease domain-containing protein.	Mitogen-activated protein kinase kinase kinase 7-like.	0.447
Exd1	pgk1	ENSSFOP00015026203	ENSSFOP00015015623	3'-5' exonuclease domain-containing protein.	Phosphoglycerate kinase.	0.556
LOC108932096	gxylt1	ENSSFOP00015016365	ENSSFOP00015007812	NPAT protein-like.	Glucoside xylosyltransferase 1-like.	0.486
Tmem117	gxylt1	ENSSFOP00015042694	ENSSFOP00015007812	Transmembrane protein 117-like.	Glucoside xylosyltransferase 1-like.	0.495
alg11	gxylt1	ENSSFOP00015003567	ENSSFOP00015007812	Uncharacterized protein.	Glucoside xylosyltransferase 1-like.	0.517
alg11	gxylt2	ENSSFOP00015003567	ENSSFOP00015025209	Uncharacterized protein.	Glucoside xylosyltransferase 2-like.	0.402
exoc2	Exd1	ENSSFOP00015021481	ENSSFOP00015026203	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.	3'-5' exonuclease domain-containing protein.	0.446
exoc2	gxylt1	ENSSFOP00015021481	ENSSFOP00015007812	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.	Glucoside xylosyltransferase 1-like.	0.485
exoc2	map3k7	ENSSFOP00015021481	ENSSFOP00015033798	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.	Mitogen-activated protein kinase kinase kinase 7-like.	0.587
exoc2	pgk1	ENSSFOP00015021481	ENSSFOP00015015623	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.	Phosphoglycerate kinase.	0.571
gxylt1	Exd1	ENSSFOP00015007812	ENSSFOP00015026203	Glucoside xylosyltransferase 1-like.	3'-5' exonuclease domain-containing protein.	0.570
gxylt1	LOC108932096	ENSSFOP00015007812	ENSSFOP00015016365	Glucoside xylosyltransferase 1-like.	NPAT protein-like.	0.486
gxylt1	Tmem117	ENSSFOP00015007812	ENSSFOP00015042694	Glucoside xylosyltransferase 1-like.	Transmembrane protein 117-like.	0.495
gxylt1	alg11	ENSSFOP00015007812	ENSSFOP00015003567	Glucoside xylosyltransferase 1-like.	Uncharacterized protein.	0.517
gxylt1	exoc2	ENSSFOP00015007812	ENSSFOP00015021481	Glucoside xylosyltransferase 1-like.	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.	0.485
gxylt1	gxylt2	ENSSFOP00015007812	ENSSFOP00015025209	Glucoside xylosyltransferase 1-like.	Glucoside xylosyltransferase 2-like.	0.903
gxylt1	map3k7	ENSSFOP00015007812	ENSSFOP00015033798	Glucoside xylosyltransferase 1-like.	Mitogen-activated protein kinase kinase kinase 7-like.	0.485