STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sf3a3Splicing factor 3A subunit 3-like. (501 aa)    
Predicted Functional Partners:
sf3a2
Splicing factor 3A subunit 2-like.
    
 0.999
snrpa1
U2 small nuclear ribonucleoprotein A'-like.
   
 0.998
sf3a1
Splicing factor 3a subunit 1.
   
 0.998
sf3b4
Splicing factor 3B subunit 4-like.
    
 0.996
sf3b3
Splicing factor 3B subunit 3-like.
   
 0.996
sf3b2
PSP domain-containing protein.
   
 0.996
ddx46
Putative ATP-dependent RNA helicase DDX46.
   
 0.995
sf3b5
Splicing factor 3B subunit 5; Belongs to the SF3B5 family.
   
 0.992
sf3b1
Splicing factor 3B subunit 1-like.
   
 0.992
cdc5l
Cell division cycle 5-like protein-like.
   
 
 0.990
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.