STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFOP00015010044Uncharacterized protein LOC108927058. (549 aa)    
Predicted Functional Partners:
ints9
Integrator complex subunit 9-like.
    
 0.592
ints1
Integrator complex subunit 1-like.
    
 0.579
ints11
Integrator complex subunit 11-like.
    
 0.578
ints4
Integrator complex subunit 4-like.
    
 0.567
ints3
Integrator complex subunit 3-like.
    
 0.561
Ints7
Integrator complex subunit 7-like.
    
 0.560
ints13
Protein asunder-like.
    
 0.559
ints10
Integrator complex subunit 10-like.
    
 0.536
Polr2b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.468
LOC108938052
Growth arrest-specific protein 6-like.
   
 
 0.454
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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