STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFOP00015011682mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli). (680 aa)    
Predicted Functional Partners:
Pms2
Mismatch repair endonuclease PMS2-like.
  
 
0.999
msh2
DNA_MISMATCH_REPAIR_2 domain-containing protein.
 
 0.993
msh6
DNA mismatch repair protein Msh6-like; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.992
mlh3
MutL_C domain-containing protein.
    
0.991
exo1
Exonuclease 1-like.
   
 0.986
pms1
PMS1 protein1-like.
  
 
0.983
msh3
MUTSd domain-containing protein.
 
 0.973
Z043_109558
ATP-dependent DNA helicase Q4-like.
  
 0.970
wrn
Werner syndrome ATP-dependent helicase isoform X1.
  
 0.955
Z043_111230
MutS protein4-like.
 
 0.951
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.