STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z043_113573Calcium and integrin-binding family member 3-like. (212 aa)    
Predicted Functional Partners:
Z043_102130
Transmembrane channel-like protein.
    
 0.840
TMC3
Transmembrane channel-like protein.
    
 0.840
CASK
Peripheral plasma membrane protein CASK-like; Belongs to the MAGUK family.
    
 0.698
CASK-2
Peripheral plasma membrane protein CASK-like.
    
 0.698
Z043_102720
Ubiquitin-conjugating enzyme E2 variant 1-like.
   
 
 0.590
xpc
DNA repair protein complementing XP-C cells-like.
    
 0.566
ENSSFOP00015014480
Ninein (GSK3B interacting protein).
    
 
 0.561
ube2v2
Ubiquitin-conjugating enzyme E2 variant 2.
   
 
 0.535
Z043_104242
Transmembrane inner ear expressed protein-like.
     
 0.492
Tmie
Transmembrane inner ear expressed protein-like.
     
 0.492
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
Server load: low (20%) [HD]