STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108924223BCS1_N domain-containing protein. (420 aa)    
Predicted Functional Partners:
LOC108928374
Cytochrome c1, heme protein, mitochondrial-like.
   
 0.792
mrpl16
39S ribosomal protein L16, mitochondrial-like; Belongs to the universal ribosomal protein uL16 family.
   
 
 0.788
mrps16
28S ribosomal protein S16, mitochondrial-like.
  
 
 0.747
LOC108936837
Cytochrome b-c1 complex subunit 8-like.
   
 
 0.747
LOC108927719
Cytochrome b-c1 complex subunit 2, mitochondrial-like; Belongs to the peptidase M16 family.
  
 0.743
Z043_124009
G domain-containing protein.
   
  
 0.721
mrpl17
Ribosomal protein L17 mitochondrial-like protein-like; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.714
mrpl27
39S ribosomal protein L27, mitochondrial-like.
  
 
 0.714
mrps9
28S ribosomal protein S9, mitochondrial-like; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.712
mrpl2
39S ribosomal protein L2, mitochondrial-like.
   
 
 0.698
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.