STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108937757Acid-sensing ion channel 3-like; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (550 aa)    
Predicted Functional Partners:
Z043_104959
Cyclin-G-associated kinase-like.
      
 0.547
LOC108935568
E3 ubiquitin-protein ligase HECW1-like.
    
 0.453
nedd4l
E3 ubiquitin-protein ligase NEDD4-like isoform X1.
    
 0.453
nedd4
E3 ubiquitin-protein ligase.
    
 0.453
LOC108929074
E3 ubiquitin-protein ligase NEDD4-like.
    
 0.453
Hecw1
E3 ubiquitin-protein ligase HECW1-like.
    
 0.453
LOC108938565
Stom protein-like.
    
 0.435
ENSSFOP00015036928
annotation not available
    
 0.435
STOML3
Erythrocyte band 7 integral membrane protein-like.
    
 0.435
LOC108922685
Erythrocyte band 7 integral membrane protein-like.
    
 0.435
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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