Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC114910717 | Mysm1 | ENSSFOP00015052804 | ENSSFOP00015045607 | Polyubiquitin-C. | Histone H2A deubiquitinase MYSM1 isoform X1. | 0.978 |
LOC114910717 | Z043_102720 | ENSSFOP00015052804 | ENSSFOP00015048712 | Polyubiquitin-C. | Ubiquitin-conjugating enzyme E2 variant 1-like. | 0.992 |
LOC114910717 | Z043_102951 | ENSSFOP00015052804 | ENSSFOP00015054306 | Polyubiquitin-C. | 26S proteasome non-ATPase regulatory subunit 4-like. | 0.993 |
LOC114910717 | mysm1 | ENSSFOP00015052804 | ENSSFOP00015074929 | Polyubiquitin-C. | Histone H2A deubiquitinase MYSM1-like. | 0.978 |
LOC114910717 | ngly1 | ENSSFOP00015052804 | ENSSFOP00015052661 | Polyubiquitin-C. | Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase-like. | 0.844 |
LOC114910717 | psmc1 | ENSSFOP00015052804 | ENSSFOP00015018261 | Polyubiquitin-C. | 26S protease regulatory subunit 4-like; Belongs to the AAA ATPase family. | 0.954 |
LOC114910717 | psmd2 | ENSSFOP00015052804 | ENSSFOP00015056088 | Polyubiquitin-C. | 26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family. | 0.973 |
LOC114910717 | rad23a | ENSSFOP00015052804 | ENSSFOP00015014745 | Polyubiquitin-C. | UV excision repair protein RAD23A-like. | 0.888 |
LOC114910717 | uba52 | ENSSFOP00015052804 | ENSSFOP00015033218 | Polyubiquitin-C. | Ubiquitin-large subunit ribosomal protein L40e. | 0.999 |
LOC114910717 | xpc | ENSSFOP00015052804 | ENSSFOP00015023937 | Polyubiquitin-C. | DNA repair protein complementing XP-C cells-like. | 0.855 |
Mysm1 | LOC114910717 | ENSSFOP00015045607 | ENSSFOP00015052804 | Histone H2A deubiquitinase MYSM1 isoform X1. | Polyubiquitin-C. | 0.978 |
Mysm1 | Z043_102720 | ENSSFOP00015045607 | ENSSFOP00015048712 | Histone H2A deubiquitinase MYSM1 isoform X1. | Ubiquitin-conjugating enzyme E2 variant 1-like. | 0.422 |
Mysm1 | Z043_102951 | ENSSFOP00015045607 | ENSSFOP00015054306 | Histone H2A deubiquitinase MYSM1 isoform X1. | 26S proteasome non-ATPase regulatory subunit 4-like. | 0.954 |
Mysm1 | mysm1 | ENSSFOP00015045607 | ENSSFOP00015074929 | Histone H2A deubiquitinase MYSM1 isoform X1. | Histone H2A deubiquitinase MYSM1-like. | 0.453 |
Mysm1 | psmc1 | ENSSFOP00015045607 | ENSSFOP00015018261 | Histone H2A deubiquitinase MYSM1 isoform X1. | 26S protease regulatory subunit 4-like; Belongs to the AAA ATPase family. | 0.955 |
Mysm1 | psmd2 | ENSSFOP00015045607 | ENSSFOP00015056088 | Histone H2A deubiquitinase MYSM1 isoform X1. | 26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family. | 0.943 |
Mysm1 | rad23a | ENSSFOP00015045607 | ENSSFOP00015014745 | Histone H2A deubiquitinase MYSM1 isoform X1. | UV excision repair protein RAD23A-like. | 0.968 |
Mysm1 | uba52 | ENSSFOP00015045607 | ENSSFOP00015033218 | Histone H2A deubiquitinase MYSM1 isoform X1. | Ubiquitin-large subunit ribosomal protein L40e. | 0.971 |
Mysm1 | xpc | ENSSFOP00015045607 | ENSSFOP00015023937 | Histone H2A deubiquitinase MYSM1 isoform X1. | DNA repair protein complementing XP-C cells-like. | 0.468 |
Z043_102720 | LOC114910717 | ENSSFOP00015048712 | ENSSFOP00015052804 | Ubiquitin-conjugating enzyme E2 variant 1-like. | Polyubiquitin-C. | 0.992 |
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