STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prkczProtein kinase C zeta type-like; Belongs to the protein kinase superfamily. (592 aa)    
Predicted Functional Partners:
LOC108933955
Partitioning defective 6beta-like.
    
 0.983
PARD3
Partitioning defective 3-like.
    
 0.983
LOC108918958
PDZ domain-containing protein.
    
 0.983
PARD3-2
PDZ domain-containing protein.
    
 0.983
pard6b
PB1 domain-containing protein.
    
 0.979
pard6g
Partitioning defective 6 gamma-like.
    
 0.979
LOC108926395
Partitioning defective 6beta-like.
    
 0.979
LLGL1
Lethal(2) giant larvae protein1-like.
    
 0.973
Llgl2
Lethal(2) giant larvae protein2-like.
    
 0.973
STK11
Serine/threonine-protein kinase STK11-like.
    
0.921
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.