STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108933934Protein DDI12-like. (950 aa)    
Predicted Functional Partners:
LOC114910717
Polyubiquitin-C.
   
 
 0.805
Rps27a
Ubiquitin and ribosomal protein S27a-like protein-like.
   
 
 0.734
psmd14
26S proteasome non-ATPase regulatory subunit 14-like.
   
 
 0.668
RAD23B
Uncharacterized protein.
   
 
 0.631
rad23a
UV excision repair protein RAD23A-like.
   
 
 0.631
RAD23B-2
UV excision repair protein RAD23B-like.
   
 
 0.631
psmd2
26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.
    
 
 0.631
LOC108919930
UV excision repair protein RAD23 homolog A-like isoform X1.
   
 
 0.631
uba52
Ubiquitin-large subunit ribosomal protein L40e.
   
   0.582
Z043_102951
26S proteasome non-ATPase regulatory subunit 4-like.
   
 
 0.579
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.