STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108922065UPF0468 protein C16orf80-like. (195 aa)    
Predicted Functional Partners:
efhb
Uncharacterized protein.
    
   0.757
Z043_119028
EF-hand domain-containing family member C2-like.
    
 
 0.723
efhc1
EF-hand domain-containing protein 1-like.
    
 
 0.723
Pacrg
Parkin coregulated gene protein.
    
 
 0.718
Pacrgl
PACRG-like protein isoform X1.
    
 
 0.718
tbc1d32
Protein broad-minded-like.
    
 
 0.707
Arl2bp
ADP-ribosylation factor-like 2 binding protein-like.
    
 
 0.691
LOC108927691
Enkurin-like.
    
 
 0.675
enkur
Enkurin-like.
    
 
 0.675
LOC108932113
Cilia- and flagella-associated protein 45-like.
    
 
 0.671
Your Current Organism:
Scleropages formosus
NCBI taxonomy Id: 113540
Other names: Asian arowana, Asian bonytongue, Osteoglossum formosum, S. formosus, golden arowana, golden dragon fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.